SNP Report

Basic Infomation

Name	rs6756407 dbSNP
Location	chr:2,103036101
Allele	G/T

LD-proxy of rSNPs(r²>0.8) (count: 44)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11465597	1.00[CEU][hapmap];0.83[CHD][hapmap]
rs11465623	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11465650	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11465660	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11465673	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11465689	1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11465711	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11465724	0.85[CEU][hapmap]
rs12989197	1.00[CEU][hapmap]
rs12996097	1.00[CEU][hapmap]
rs12999517	1.00[CEU][hapmap];0.83[CHD][hapmap]
rs12999542	1.00[CEU][hapmap]
rs13028993	1.00[CEU][hapmap]
rs13388541	0.82[CEU][hapmap]
rs1558653	0.85[CEU][hapmap]
rs17027293	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs17027295	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs17027352	0.82[CEU][hapmap]
rs17651485	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.91[TSI][hapmap];0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17772203	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs17821875	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1946131	1.00[CEU][hapmap];0.83[CHD][hapmap]
rs2080315	0.85[CEU][hapmap]
rs2080316	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs3771179	0.83[CHD][hapmap]
rs3849363	0.85[CEU][hapmap]
rs41348650	1.00[JPT][hapmap]
rs56151044	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62151904	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs62152712	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6543145	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs6543147	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs6543148	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs6736822	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs6737325	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs6741464	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs6747752	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs6751282	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs6751666	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs6753066	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs6756536	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs7566613	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs7582118	0.85[CEU][hapmap];1.00[JPT][hapmap]
rs7607856	0.85[CEU][hapmap];1.00[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
IL18RAP	Proximal transcriptional regulation
IL18RAP	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)