SNP Report

Basic Infomation

Name	rs11465689 dbSNP
Location	chr:2,103040167
Allele	C/A

LD-proxy of rSNPs(r²>0.8) (count: 41)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10169192	0.82[CHB][hapmap]
rs11465623	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11465650	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11465660	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11465673	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11465700	0.82[CHB][hapmap]
rs11465711	1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11886793	0.82[CHB][hapmap]
rs17027293	1.00[JPT][hapmap]
rs17027295	1.00[JPT][hapmap]
rs17651485	1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17772203	1.00[JPT][hapmap]
rs17821875	1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2080316	1.00[JPT][hapmap]
rs41348650	1.00[JPT][hapmap]
rs4851010	0.82[CHB][hapmap]
rs4851593	0.82[CHB][hapmap]
rs56151044	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62151904	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs62152712	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6543133	0.82[CHB][hapmap]
rs6543138	0.82[CHB][hapmap]
rs6543144	0.82[CHB][hapmap]
rs6543145	1.00[JPT][hapmap]
rs6543147	1.00[JPT][hapmap]
rs6543148	1.00[JPT][hapmap]
rs6736135	0.82[CHB][hapmap]
rs6736822	1.00[JPT][hapmap]
rs6737325	1.00[JPT][hapmap]
rs6741464	1.00[JPT][hapmap]
rs6747752	1.00[JPT][hapmap]
rs6748390	0.82[CHB][hapmap]
rs6751282	1.00[JPT][hapmap]
rs6751666	1.00[JPT][hapmap]
rs6753066	1.00[JPT][hapmap]
rs6756407	1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6756536	1.00[JPT][hapmap]
rs7566613	1.00[JPT][hapmap]
rs7582118	1.00[JPT][hapmap]
rs7602207	0.82[CHB][hapmap]
rs7607856	1.00[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
IL18RAP	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)