SNP Report

Basic Infomation

Name	rs11465673 dbSNP
Location	chr:2,103035375
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 37)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11465597	1.00[CEU][hapmap]
rs11465623	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11465650	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11465660	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11465689	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11465711	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12989197	1.00[CEU][hapmap]
rs12996097	1.00[CEU][hapmap]
rs12999517	1.00[CEU][hapmap]
rs12999542	1.00[CEU][hapmap]
rs13028993	1.00[CEU][hapmap]
rs17027293	1.00[JPT][hapmap]
rs17027295	1.00[JPT][hapmap]
rs17651485	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17772203	1.00[JPT][hapmap]
rs17821875	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1946131	1.00[CEU][hapmap]
rs2080316	1.00[JPT][hapmap]
rs41348650	1.00[JPT][hapmap]
rs56151044	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62151904	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs62152712	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6543145	1.00[JPT][hapmap]
rs6543147	1.00[JPT][hapmap]
rs6543148	1.00[JPT][hapmap]
rs6736822	1.00[JPT][hapmap]
rs6737325	1.00[JPT][hapmap]
rs6741464	1.00[JPT][hapmap]
rs6747752	1.00[JPT][hapmap]
rs6751282	1.00[JPT][hapmap]
rs6751666	1.00[JPT][hapmap]
rs6753066	1.00[JPT][hapmap]
rs6756407	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6756536	1.00[JPT][hapmap]
rs7566613	1.00[JPT][hapmap]
rs7582118	1.00[JPT][hapmap]
rs7607856	1.00[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
IL18RAP	Proximal transcriptional regulation
IL18RAP	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)