SNP Report

Basic Infomation

Name	rs6731245 dbSNP
Location	chr:2,103237912
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 37)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11894620	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12053191	0.95[ASN][1000 genomes]
rs17027576	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1861227	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2110636	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2160187	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28696001	0.97[ASN][1000 genomes]
rs2871478	0.98[ASN][1000 genomes]
rs3806579	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3806580	0.98[ASN][1000 genomes]
rs3806581	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57150829	0.98[ASN][1000 genomes]
rs59038885	0.98[ASN][1000 genomes]
rs59642933	0.98[ASN][1000 genomes]
rs6543168	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6543169	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6543172	0.98[ASN][1000 genomes]
rs6543173	0.98[ASN][1000 genomes]
rs6650792	0.80[ASN][1000 genomes]
rs6708609	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6755047	0.97[ASN][1000 genomes]
rs72828025	0.91[EUR][1000 genomes]
rs72997645	0.97[ASN][1000 genomes]
rs72997648	0.97[ASN][1000 genomes]
rs72997651	0.97[ASN][1000 genomes]
rs7567717	0.95[ASN][1000 genomes]
rs7573974	0.84[EUR][1000 genomes]
rs7576791	0.95[ASN][1000 genomes]
rs7582939	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7583774	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7591841	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7593439	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7602695	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7603628	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7603632	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7603856	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9678846	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SLC9A2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)