SNP Report

Basic Infomation

Name	rs11894620 dbSNP
Location	chr:2,103218524
Allele	T/A

LD-proxy of rSNPs(r²>0.8) (count: 21)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17027576	0.84[EUR][1000 genomes]
rs1861227	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2110636	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2160187	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3806579	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3806581	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6543168	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6543169	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6708609	0.86[EUR][1000 genomes]
rs6731245	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72828025	0.93[EUR][1000 genomes]
rs7573974	0.81[EUR][1000 genomes]
rs7582939	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7583774	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7591841	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7593439	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7602695	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7603628	0.91[EUR][1000 genomes]
rs7603632	0.91[EUR][1000 genomes]
rs7603856	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9678846	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)