SNP Report
Basic Infomation
| Name | rs72828025 dbSNP |
|---|---|
| Location | chr:2,103261207 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 19)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11894620 | 0.93[EUR][1000 genomes] |
| rs1861227 | 0.91[EUR][1000 genomes] |
| rs2110636 | 0.91[EUR][1000 genomes] |
| rs2160187 | 0.91[EUR][1000 genomes] |
| rs3806579 | 0.80[EUR][1000 genomes] |
| rs3806581 | 0.91[EUR][1000 genomes] |
| rs6543168 | 0.91[EUR][1000 genomes] |
| rs6543169 | 0.88[EUR][1000 genomes] |
| rs6708609 | 0.80[EUR][1000 genomes] |
| rs6731245 | 0.91[EUR][1000 genomes] |
| rs7582939 | 0.91[EUR][1000 genomes] |
| rs7583774 | 0.80[EUR][1000 genomes] |
| rs7591841 | 0.80[EUR][1000 genomes] |
| rs7593439 | 0.80[EUR][1000 genomes] |
| rs7602695 | 0.91[EUR][1000 genomes] |
| rs7603628 | 0.85[EUR][1000 genomes] |
| rs7603632 | 0.85[EUR][1000 genomes] |
| rs7603856 | 0.93[EUR][1000 genomes] |
| rs9678846 | 0.80[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| SLC9A2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014