SNP Report
Name | rs6671518   dbSNP |
---|---|
Location | chr:1,114100984 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11102629 | 0.87[CEU][hapmap] |
rs11102646 | 0.87[CEU][hapmap] |
rs11577235 | 0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11578447 | 0.87[CEU][hapmap] |
rs11579386 | 1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.87[TSI][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs12117465 | 0.87[CEU][hapmap] |
rs12130729 | 0.87[CEU][hapmap] |
rs12131115 | 0.87[CEU][hapmap] |
rs12144505 | 0.87[CEU][hapmap] |
rs12145834 | 0.85[CEU][hapmap] |
rs17031640 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs17031645 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs17031648 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs17448063 | 1.00[CEU][hapmap] |
rs17461007 | 0.87[CEU][hapmap] |
rs17461231 | 0.87[CEU][hapmap] |
rs17507884 | 0.87[CEU][hapmap] |
rs2359410 | 0.90[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs35955172 | 0.82[AFR][1000 genomes] |
rs56092022 | 0.90[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs6537788 | 0.87[CEU][hapmap] |
rs6663791 | 0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs6694929 | 1.00[ASW][hapmap];0.97[MKK][hapmap];0.89[YRI][hapmap] |
rs6696459 | 1.00[CEU][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7514186 | 1.00[CEU][hapmap];0.89[YRI][hapmap];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs7528311 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs7533429 | 0.87[CEU][hapmap] |
rs7545980 | 1.00[ASW][hapmap];1.00[LWK][hapmap];0.97[MKK][hapmap];0.89[YRI][hapmap] |
rs7547536 | 0.82[AFR][1000 genomes] |
rs7553181 | 0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7554422 | 1.00[ASW][hapmap];1.00[LWK][hapmap];0.97[MKK][hapmap];0.88[YRI][hapmap];0.82[AFR][1000 genomes] |
rs7555259 | 1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
MAGI3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014