SNP Report
Name | rs6545758   dbSNP |
---|---|
Location | chr:2,25074874 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10171663 | 0.80[CEU][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes] |
rs10184813 | 0.80[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap];0.89[ASN][1000 genomes] |
rs10187348 | 0.81[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.89[ASN][1000 genomes] |
rs10195271 | 0.82[CEU][hapmap];0.82[CHB][hapmap];0.86[CHD][hapmap];0.86[GIH][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes] |
rs10196998 | 0.87[ASN][1000 genomes] |
rs10207698 | 0.82[CHB][hapmap] |
rs10865315 | 0.86[JPT][hapmap] |
rs11675013 | 0.82[CEU][hapmap];0.82[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes] |
rs11675457 | 0.86[GIH][hapmap];0.90[JPT][hapmap] |
rs11683212 | 0.81[CHB][hapmap] |
rs11684619 | 0.81[CHB][hapmap];0.89[JPT][hapmap];0.89[ASN][1000 genomes] |
rs11685125 | 0.89[JPT][hapmap];0.88[ASN][1000 genomes] |
rs11686663 | 0.86[JPT][hapmap] |
rs11687089 | 0.90[JPT][hapmap] |
rs11688665 | 0.82[CHB][hapmap] |
rs11688754 | 0.81[CHB][hapmap] |
rs11892869 | 0.90[JPT][hapmap] |
rs12713419 | 0.82[CHB][hapmap];0.82[MEX][hapmap] |
rs12986610 | 0.82[CEU][hapmap];0.82[CHB][hapmap];0.86[CHD][hapmap];0.90[GIH][hapmap];0.86[JPT][hapmap];0.86[MEX][hapmap];0.85[ASN][1000 genomes] |
rs13012304 | 0.82[CHB][hapmap] |
rs13030692 | 0.85[ASN][1000 genomes] |
rs13387053 | 0.82[CEU][hapmap];0.82[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes] |
rs13387729 | 0.95[JPT][hapmap] |
rs13398155 | 0.82[CHB][hapmap] |
rs13404163 | 0.82[CHB][hapmap] |
rs13407913 | 0.90[JPT][hapmap] |
rs13410999 | 0.90[JPT][hapmap] |
rs13412941 | 0.82[CEU][hapmap];0.82[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes] |
rs13428789 | 0.89[ASN][1000 genomes] |
rs1529897 | 0.85[GIH][hapmap];0.85[JPT][hapmap] |
rs1541984 | 0.86[GIH][hapmap];0.90[JPT][hapmap] |
rs17046737 | 0.82[CHB][hapmap] |
rs1865687 | 0.81[CHB][hapmap] |
rs1865688 | 0.82[CEU][hapmap];0.82[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes] |
rs1865689 | 0.83[GIH][hapmap];0.81[JPT][hapmap] |
rs1968482 | 0.82[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.89[ASN][1000 genomes] |
rs2033653 | 0.86[JPT][hapmap] |
rs2033654 | 0.86[JPT][hapmap] |
rs2033655 | 0.86[GIH][hapmap];0.86[JPT][hapmap] |
rs2033656 | 0.86[JPT][hapmap] |
rs2384056 | 0.82[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.89[ASN][1000 genomes] |
rs2384058 | 0.86[JPT][hapmap] |
rs2384059 | 0.86[JPT][hapmap] |
rs36071142 | 0.89[ASN][1000 genomes] |
rs4077677 | 0.81[CHB][hapmap] |
rs4077679 | 0.82[CHB][hapmap] |
rs4077680 | 0.80[CHB][hapmap] |
rs58648793 | 0.88[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs61117682 | 0.89[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs6545776 | 0.90[JPT][hapmap] |
rs6545808 | 0.82[CHB][hapmap] |
rs6760328 | 0.95[CEU][hapmap];0.82[CHB][hapmap];0.88[CHD][hapmap];0.91[GIH][hapmap];0.90[JPT][hapmap];0.86[MEX][hapmap];0.94[TSI][hapmap];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7565468 | 0.82[CHB][hapmap] |
rs7567997 | 0.90[JPT][hapmap] |
rs7576788 | 0.90[JPT][hapmap] |
rs7580081 | 0.90[JPT][hapmap] |
rs7586879 | 0.82[CHB][hapmap] |
rs7591460 | 0.86[JPT][hapmap] |
rs7597157 | 0.82[CEU][hapmap];0.82[CHB][hapmap];0.88[CHD][hapmap];0.86[GIH][hapmap];0.90[JPT][hapmap];0.86[MEX][hapmap];0.89[ASN][1000 genomes] |
rs7597332 | 0.95[JPT][hapmap] |
rs7608185 | 0.81[CHB][hapmap] |
rs7608976 | 0.95[JPT][hapmap] |
rs916484 | 0.82[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.89[ASN][1000 genomes] |
rs916485 | 0.90[JPT][hapmap] |
rs916486 | 0.82[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.89[ASN][1000 genomes] |
rs9631061 | 0.83[ASN][1000 genomes] |
rs9631062 | 0.82[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ADCY3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014