SNP Report

Basic Infomation

Name	rs58648793 dbSNP
Location	chr:2,25075876
Allele	T/-/TGTGTGT

LD-proxy of rSNPs(r²>0.8) (count: 25)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10171663	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10184813	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10187348	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10195271	0.86[ASN][1000 genomes]
rs10196998	0.89[ASN][1000 genomes]
rs11675013	0.86[ASN][1000 genomes]
rs11684619	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11685125	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12986610	0.86[ASN][1000 genomes]
rs13030692	0.86[ASN][1000 genomes]
rs13387053	0.86[ASN][1000 genomes]
rs13412941	0.86[ASN][1000 genomes]
rs13428789	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1865688	0.86[ASN][1000 genomes]
rs1968482	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2384056	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs36071142	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61117682	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6545758	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6760328	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7597157	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs916484	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs916486	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9631061	0.84[ASN][1000 genomes]
rs9631062	0.83[ASN][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)