SNP Report

Basic Infomation

Name	rs617232 dbSNP
Location	chr:1,155643147
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 60)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10796952	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11264417	0.81[ASW][hapmap]
rs11802649	0.81[AMR][1000 genomes]
rs1625821	0.89[AMR][1000 genomes]
rs1627630	0.81[ASW][hapmap];0.89[AMR][1000 genomes]
rs168343	0.89[AMR][1000 genomes]
rs171168	0.81[ASW][hapmap];0.89[AMR][1000 genomes]
rs1749412	0.81[ASW][hapmap];0.89[AMR][1000 genomes]
rs1749413	0.89[AMR][1000 genomes]
rs1749414	0.89[AMR][1000 genomes]
rs1749422	0.89[AMR][1000 genomes]
rs1756242	0.81[ASW][hapmap];0.89[AMR][1000 genomes]
rs182979	0.81[AMR][1000 genomes]
rs1886618	0.89[AMR][1000 genomes]
rs2136920	0.89[AMR][1000 genomes]
rs2175389	0.89[AMR][1000 genomes]
rs2363017	0.85[YRI][hapmap];0.89[AMR][1000 genomes]
rs2485472	0.89[AMR][1000 genomes]
rs2666828	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2885676	0.81[ASW][hapmap];0.89[AMR][1000 genomes]
rs348188	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs348189	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs348190	0.81[AMR][1000 genomes]
rs348191	0.89[AMR][1000 genomes]
rs348194	0.81[AMR][1000 genomes]
rs348197	0.89[AMR][1000 genomes]
rs348199	0.89[AMR][1000 genomes]
rs348200	0.89[AMR][1000 genomes]
rs348207	0.89[AMR][1000 genomes]
rs348208	0.89[AMR][1000 genomes]
rs348209	0.89[AMR][1000 genomes]
rs4581273	0.89[AMR][1000 genomes]
rs492669	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4971058	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.89[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs512551	0.85[YRI][hapmap];0.89[AMR][1000 genomes]
rs540380	0.81[ASW][hapmap];0.89[AMR][1000 genomes]
rs568672	0.89[AMR][1000 genomes]
rs606755	0.89[AMR][1000 genomes]
rs607036	1.00[ASW][hapmap];1.00[LWK][hapmap];0.98[MKK][hapmap];0.89[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6688399	0.89[AMR][1000 genomes]
rs670787	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs683121	0.81[AMR][1000 genomes]
rs8179457	0.81[YRI][hapmap];0.89[AMR][1000 genomes]
rs822017	0.89[AMR][1000 genomes]
rs822021	0.81[ASW][hapmap];0.89[AMR][1000 genomes]
rs822023	0.89[AMR][1000 genomes]
rs822024	0.89[AMR][1000 genomes]
rs822027	0.81[ASW][hapmap];0.89[AMR][1000 genomes]
rs822479	0.89[AMR][1000 genomes]
rs822483	0.89[AMR][1000 genomes]
rs822492	0.89[AMR][1000 genomes]
rs822496	0.81[ASW][hapmap]
rs822498	0.81[ASW][hapmap];0.89[AMR][1000 genomes]
rs822522	0.89[AMR][1000 genomes]
rs866603	0.81[ASW][hapmap];0.89[AMR][1000 genomes]
rs9426928	0.96[AFR][1000 genomes]
rs9427221	0.88[ASW][hapmap];0.82[MKK][hapmap];0.81[AMR][1000 genomes]
rs9427222	0.89[AMR][1000 genomes]
rs9427227	0.89[AMR][1000 genomes]
rs9427229	0.89[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
YY1AP1	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)