SNP Report

Basic Infomation

Name	rs11802649 dbSNP
Location	chr:1,155644436
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 14)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10796952	0.81[AMR][1000 genomes]
rs182979	1.00[AMR][1000 genomes]
rs2666828	0.81[AMR][1000 genomes]
rs348188	0.81[AMR][1000 genomes]
rs348189	0.81[AMR][1000 genomes]
rs348190	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs348194	1.00[AMR][1000 genomes]
rs492669	0.81[AMR][1000 genomes]
rs4971058	0.81[AMR][1000 genomes]
rs607036	0.81[AMR][1000 genomes]
rs617232	0.81[AMR][1000 genomes]
rs670787	0.81[AMR][1000 genomes]
rs683121	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9427221	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)