SNP Report

Basic Infomation

Name	rs11264417 dbSNP
Location	chr:1,155817788
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1627630	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs171168	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs1749412	1.00[ASW][hapmap];0.94[LWK][hapmap];1.00[MKK][hapmap];0.96[YRI][hapmap];0.82[AFR][1000 genomes]
rs1749414	0.83[AFR][1000 genomes]
rs1756242	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs1765280	0.83[AFR][1000 genomes]
rs1886618	1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs2363017	0.88[YRI][hapmap]
rs2485472	0.83[AFR][1000 genomes]
rs2885676	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs348207	1.00[YRI][hapmap]
rs4581273	0.84[AFR][1000 genomes]
rs4971058	0.81[ASW][hapmap]
rs512551	0.93[ASW][hapmap];0.80[LWK][hapmap];0.82[MKK][hapmap];0.88[YRI][hapmap]
rs540380	1.00[ASW][hapmap];0.83[LWK][hapmap];1.00[YRI][hapmap]
rs607036	0.81[ASW][hapmap]
rs617232	0.81[ASW][hapmap]
rs6427290	0.84[AFR][1000 genomes]
rs6688399	0.93[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs708613	1.00[YRI][hapmap]
rs8179457	0.83[YRI][hapmap]
rs822021	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs822027	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs822479	0.90[YRI][hapmap]
rs822483	0.82[AFR][1000 genomes]
rs822487	0.85[AFR][1000 genomes]
rs822496	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs822498	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs822521	0.93[ASW][hapmap];0.87[LWK][hapmap];0.81[MKK][hapmap];0.88[YRI][hapmap]
rs866603	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
GON4L	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)