SNP Report
Name | rs6104432   dbSNP |
---|---|
Location | chr:20,44652015 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11086991 | 1.00[LWK][hapmap];1.00[MKK][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes] |
rs11086992 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11086993 | 0.92[AFR][1000 genomes] |
rs1111750 | 1.00[MEX][hapmap] |
rs16990971 | 1.00[MEX][hapmap] |
rs16991048 | 1.00[MEX][hapmap] |
rs16991059 | 1.00[MEX][hapmap] |
rs197663 | 1.00[MEX][hapmap] |
rs197666 | 1.00[MEX][hapmap] |
rs197667 | 1.00[MEX][hapmap] |
rs2297194 | 1.00[MEX][hapmap] |
rs3918260 | 1.00[LWK][hapmap];1.00[MKK][hapmap];0.91[YRI][hapmap];0.91[AFR][1000 genomes] |
rs3918265 | 0.88[AFR][1000 genomes] |
rs3918266 | 0.94[AFR][1000 genomes] |
rs6094240 | 0.92[AFR][1000 genomes] |
rs6104433 | 1.00[LWK][hapmap];0.82[MKK][hapmap];0.95[YRI][hapmap];0.86[AFR][1000 genomes] |
rs6104434 | 0.91[AFR][1000 genomes] |
rs6130977 | 1.00[MEX][hapmap] |
rs6130978 | 1.00[MEX][hapmap] |
rs7272980 | 0.93[AFR][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000204044 | Proximal transcriptional regulation |
ZNF335 | Distal transcriptional regulation |
NCOA5 | Distal transcriptional regulation |
SLC12A5 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014