SNP Report

Basic Infomation

Name	rs7272980 dbSNP
Location	chr:20,44661244
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10211842	0.83[AMR][1000 genomes]
rs11086991	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11086992	0.93[AFR][1000 genomes]
rs11086993	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12942	0.83[AMR][1000 genomes]
rs13433222	0.83[AMR][1000 genomes]
rs3848720	0.83[AMR][1000 genomes]
rs3918260	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3918265	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3918266	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58727166	0.83[AMR][1000 genomes]
rs58935660	0.83[AMR][1000 genomes]
rs6094240	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6104413	0.83[AMR][1000 genomes]
rs6104414	0.83[AMR][1000 genomes]
rs6104416	0.83[AMR][1000 genomes]
rs6104432	0.93[AFR][1000 genomes]
rs6104433	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6104434	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6104436	0.85[AMR][1000 genomes]
rs6104441	1.00[AMR][1000 genomes]
rs6104447	0.83[AMR][1000 genomes]
rs6104451	0.83[AMR][1000 genomes]
rs6104453	0.83[AMR][1000 genomes]
rs6104454	0.83[AMR][1000 genomes]
rs6104455	0.83[AMR][1000 genomes]
rs73295253	0.83[AMR][1000 genomes]
rs73295268	0.83[AMR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)