SNP Report

Basic Infomation

Name	rs58727166 dbSNP
Location	chr:20,44698311
Allele	A/T

LD-proxy of rSNPs(r²>0.8) (count: 25)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10774	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs11086991	0.83[AMR][1000 genomes]
rs11086993	0.83[AMR][1000 genomes]
rs12942	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3918260	0.83[AMR][1000 genomes]
rs3918265	0.83[AMR][1000 genomes]
rs3918266	0.83[AMR][1000 genomes]
rs58935660	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6094240	0.83[AMR][1000 genomes]
rs6094247	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs6094250	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs6104433	0.83[AMR][1000 genomes]
rs6104434	0.83[AMR][1000 genomes]
rs6104441	0.83[AMR][1000 genomes]
rs6104447	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6104449	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs6104450	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs6104451	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6104453	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6104454	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6104455	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6104458	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs6104461	0.92[AMR][1000 genomes]
rs7272980	0.83[AMR][1000 genomes]
rs9653615	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)