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rVarBase
SNP Report
Basic Infomation
Name
rs6104011  
dbSNP
Location
chr:20,43733503
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs13041506
0.87[EUR][1000 genomes]
rs13042667
0.87[EUR][1000 genomes]
rs17422688
0.84[EUR][1000 genomes]
rs2157360
0.82[AFR][1000 genomes]
rs35828065
0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6017488
0.89[EUR][1000 genomes]
rs6017489
0.89[EUR][1000 genomes]
rs6017491
0.81[AFR][1000 genomes]
rs6031991
0.91[AFR][1000 genomes]
rs6104012
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62206429
0.88[EUR][1000 genomes]
rs763058
0.81[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
KCNS1
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)