SNP Report

Basic Infomation

Name	rs56155082 dbSNP
Location	chr:17,57639056
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11654618	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11658504	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2014295	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2014756	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28564580	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4968382	0.82[EUR][1000 genomes]
rs4968383	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4968384	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6503923	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6503929	0.85[ASN][1000 genomes]
rs7209369	0.86[ASN][1000 genomes]
rs7210390	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7210832	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7210881	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7218306	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8066493	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8066828	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8067773	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs916910	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9893638	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9896884	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9899390	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9901166	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9903999	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9906665	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9909087	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9911670	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9913684	0.84[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
DHX40	Proximal transcriptional regulation
DHX40	Distal transcriptional regulation
CLTC	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)