SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 37)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10747971	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10784338	0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs10784353	0.93[JPT][hapmap]
rs10784356	0.93[JPT][hapmap]
rs10784359	0.84[JPT][hapmap]
rs10784369	0.92[JPT][hapmap]
rs10877891	0.85[JPT][hapmap]
rs10877990	0.92[JPT][hapmap]
rs10878049	0.85[JPT][hapmap]
rs10878089	0.84[JPT][hapmap]
rs11174609	0.84[JPT][hapmap]
rs11174670	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11175024	0.84[JPT][hapmap]
rs12813098	0.85[JPT][hapmap]
rs12823555	0.84[JPT][hapmap]
rs1482281	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs1586038	0.92[JPT][hapmap]
rs1600866	0.93[JPT][hapmap]
rs1813122	0.90[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs2128277	0.85[JPT][hapmap]
rs2404352	0.93[JPT][hapmap]
rs2896825	0.92[JPT][hapmap]
rs3925535	0.85[JPT][hapmap]
rs4768200	0.82[JPT][hapmap]
rs530602	0.85[JPT][hapmap]
rs555740	0.84[JPT][hapmap]
rs6581504	0.85[JPT][hapmap]
rs6650226	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs716268	0.85[JPT][hapmap]
rs7313209	0.85[JPT][hapmap]
rs7313231	0.84[JPT][hapmap]
rs7953129	0.93[JPT][hapmap];0.80[ASN][1000 genomes]
rs7954875	0.95[CHB][hapmap];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7959498	0.85[JPT][hapmap]
rs7960662	0.93[JPT][hapmap]
rs7964150	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9669240	0.85[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
SLC2A13	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)