SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12625006	0.94[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs17093560	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs2149282	0.81[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs3746599	0.89[CHB][hapmap];0.89[JPT][hapmap]
rs4911532	0.94[JPT][hapmap]
rs6060930	0.84[CHB][hapmap];0.94[JPT][hapmap];0.86[ASN][1000 genomes]
rs6142553	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6142567	1.00[AFR][1000 genomes];0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
TPX2	Distal transcriptional regulation
TPX2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)