SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 6)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12625006	0.86[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs3746599	0.91[CHB][hapmap];0.86[JPT][hapmap]
rs4911528	0.81[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs4911532	0.88[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs6060930	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs6142553	0.87[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
TPX2	Distal transcriptional regulation
TPX2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)