SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 20)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11264415	1.00[GIH][hapmap];1.00[MEX][hapmap];0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs11264418	1.00[GIH][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap]
rs12061759	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12066633	1.00[GIH][hapmap];1.00[MEX][hapmap];0.85[YRI][hapmap]
rs12075435	0.84[YRI][hapmap];1.00[AMR][1000 genomes]
rs12095373	1.00[GIH][hapmap];1.00[MEX][hapmap];0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs12097744	1.00[GIH][hapmap];1.00[MEX][hapmap];0.85[YRI][hapmap]
rs16836999	0.85[YRI][hapmap]
rs16837068	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs16837089	0.86[LWK][hapmap];1.00[MKK][hapmap]
rs6674865	1.00[GIH][hapmap];1.00[MEX][hapmap];0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs6675202	1.00[AMR][1000 genomes]
rs6687169	1.00[GIH][hapmap];1.00[MEX][hapmap]
rs6692929	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.91[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6702507	1.00[AMR][1000 genomes]
rs74116434	1.00[AMR][1000 genomes]
rs7520381	1.00[GIH][hapmap];1.00[MEX][hapmap];0.85[YRI][hapmap]
rs7523409	0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs7530638	1.00[AMR][1000 genomes]
rs7546314	1.00[GIH][hapmap];1.00[MEX][hapmap];0.85[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
GON4L	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)