SNP Report
Basic Infomation
| Name | rs41294376 dbSNP |
|---|---|
| Location | chr:11,64073326 |
| Allele | C/A |
LD-proxy of rSNPs(r2>0.8) (count: 31)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10128649 | 0.93[ASN][1000 genomes] |
| rs10556 | 0.91[ASN][1000 genomes] |
| rs1213140 | 0.98[ASN][1000 genomes] |
| rs12271952 | 0.84[ASN][1000 genomes] |
| rs12281471 | 0.89[ASN][1000 genomes] |
| rs12283639 | 0.89[ASN][1000 genomes] |
| rs12287065 | 0.91[ASN][1000 genomes] |
| rs12575690 | 0.87[ASN][1000 genomes] |
| rs12577422 | 0.81[ASN][1000 genomes] |
| rs1468558 | 0.91[ASN][1000 genomes] |
| rs17159027 | 0.93[ASN][1000 genomes] |
| rs1783518 | 0.81[ASN][1000 genomes] |
| rs2079786 | 0.82[ASN][1000 genomes] |
| rs2232410 | 0.93[ASN][1000 genomes] |
| rs2282548 | 0.89[ASN][1000 genomes] |
| rs2286612 | 0.82[ASN][1000 genomes] |
| rs2289572 | 0.87[ASN][1000 genomes] |
| rs2302262 | 0.91[ASN][1000 genomes] |
| rs3759056 | 0.89[ASN][1000 genomes] |
| rs493052 | 0.95[ASN][1000 genomes] |
| rs58721876 | 0.91[ASN][1000 genomes] |
| rs59283629 | 0.91[ASN][1000 genomes] |
| rs60421451 | 0.93[ASN][1000 genomes] |
| rs61431997 | 0.91[ASN][1000 genomes] |
| rs621816 | 0.91[ASN][1000 genomes] |
| rs7110262 | 0.91[ASN][1000 genomes] |
| rs7118199 | 0.82[ASN][1000 genomes] |
| rs7121001 | 0.81[ASN][1000 genomes] |
| rs7950922 | 0.89[ASN][1000 genomes] |
| rs7951858 | 0.93[ASN][1000 genomes] |
| rs7952435 | 0.87[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ESRRA | Proximal transcriptional regulation |
| ZNF696 | Distal transcriptional regulation |
| RNU1-5 | Distal transcriptional regulation |
| MYL6 | Distal transcriptional regulation |
| ENSG00000257809 | Distal transcriptional regulation |
| TAOK1 | Distal transcriptional regulation |
| FAM83G | Distal transcriptional regulation |
| ZFP36 | Distal transcriptional regulation |
| WDR67 | Distal transcriptional regulation |
| FAM108B1 | Distal transcriptional regulation |
| GEMIN8 | Distal transcriptional regulation |
| C1GALT1C1 | Distal transcriptional regulation |
| CCDC88B | Distal transcriptional regulation |
| RPS6KA4 | Distal transcriptional regulation |
| ENSG00000181908 | Distal transcriptional regulation |
| MACROD1 | Distal transcriptional regulation |
| STIP1 | Distal transcriptional regulation |
| DNAJC4 | Distal transcriptional regulation |
| ENSG00000256116 | Distal transcriptional regulation |
| VEGFB | Distal transcriptional regulation |
| FKBP2 | Distal transcriptional regulation |
| PPP1R14B | Distal transcriptional regulation |
| ENSG00000256940 | Distal transcriptional regulation |
| ENSG00000257086 | Distal transcriptional regulation |
| PLCB3 | Distal transcriptional regulation |
| GPR137 | Distal transcriptional regulation |
| BAD | Distal transcriptional regulation |
| ENSG00000207024 | Distal transcriptional regulation |
| KCNK4 | Distal transcriptional regulation |
| MEN1 | Distal transcriptional regulation |
| OTUB1 | Distal transcriptional regulation |
| TRPT1 | Distal transcriptional regulation |
| NUDT22 | Distal transcriptional regulation |
| TEX40 | Distal transcriptional regulation |
| NRXN2 | Distal transcriptional regulation |
| ESRRA | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014