SNP Report
Name | rs3813921   dbSNP |
---|---|
Location | chr:20,30921846 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1028563 | 0.84[JPT][hapmap];0.80[ASN][1000 genomes] |
rs1029116 | 1.00[CEU][hapmap];0.84[JPT][hapmap];0.96[TSI][hapmap];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs1040751 | 0.85[EUR][1000 genomes] |
rs1129012 | 0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs11699120 | 0.84[JPT][hapmap];0.81[ASN][1000 genomes] |
rs12479832 | 0.83[CHB][hapmap];0.85[MEX][hapmap] |
rs12480004 | 0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs1412997 | 0.84[JPT][hapmap] |
rs1412998 | 0.89[JPT][hapmap];0.82[ASN][1000 genomes] |
rs14353 | 0.84[JPT][hapmap];0.83[ASN][1000 genomes] |
rs17266770 | 0.81[CHB][hapmap] |
rs17267078 | 0.83[CHB][hapmap] |
rs1737887 | 0.80[CEU][hapmap];0.84[JPT][hapmap];0.96[YRI][hapmap];0.86[AFR][1000 genomes] |
rs1737890 | 0.84[CEU][hapmap] |
rs1885292 | 0.84[JPT][hapmap] |
rs2151437 | 0.84[JPT][hapmap] |
rs2208131 | 0.84[JPT][hapmap];0.82[ASN][1000 genomes] |
rs2281361 | 0.83[CHB][hapmap];0.85[MEX][hapmap] |
rs2295454 | 0.84[JPT][hapmap];0.82[ASN][1000 genomes] |
rs2295762 | 0.84[JPT][hapmap] |
rs2295764 | 0.84[JPT][hapmap] |
rs2424873 | 1.00[ASW][hapmap];1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2424876 | 0.97[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs2424885 | 0.93[EUR][1000 genomes] |
rs34315674 | 0.93[EUR][1000 genomes] |
rs34358744 | 0.93[EUR][1000 genomes] |
rs3746606 | 0.84[JPT][hapmap] |
rs3746611 | 0.80[JPT][hapmap] |
rs3787373 | 0.84[JPT][hapmap] |
rs3813922 | 0.80[YRI][hapmap] |
rs3818190 | 0.84[JPT][hapmap] |
rs4575791 | 0.84[JPT][hapmap] |
rs4911229 | 0.84[JPT][hapmap] |
rs6057570 | 0.91[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs6061194 | 0.83[CHB][hapmap];0.85[MEX][hapmap] |
rs6087862 | 1.00[CEU][hapmap];0.84[JPT][hapmap];0.96[TSI][hapmap];0.91[EUR][1000 genomes] |
rs6087882 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs6119231 | 0.81[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs6119241 | 0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs6119771 | 0.83[CHB][hapmap] |
rs6141292 | 0.81[ASN][1000 genomes] |
rs6141294 | 0.84[JPT][hapmap];0.82[ASN][1000 genomes] |
rs6141302 | 0.84[JPT][hapmap] |
rs6141659 | 0.84[JPT][hapmap] |
rs6141680 | 0.81[ASN][1000 genomes] |
rs6141682 | 0.81[ASN][1000 genomes] |
rs6141689 | 0.82[ASN][1000 genomes] |
rs6141721 | 0.84[JPT][hapmap] |
rs6141723 | 0.80[JPT][hapmap] |
rs62206870 | 0.80[ASN][1000 genomes] |
rs8118061 | 0.83[CHB][hapmap] |
Symbol | Regulation type |
---|---|
KIF3B | Proximal transcriptional regulation |
ASXL1 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014