SNP Report

Basic Infomation

Name	rs296520 dbSNP
Location	chr:1,200880978
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 18)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10800746	0.90[EUR][1000 genomes]
rs10920074	0.82[EUR][1000 genomes]
rs11583546	0.89[EUR][1000 genomes]
rs11584383	1.00[ASN][1000 genomes]
rs11589638	0.85[EUR][1000 genomes]
rs12131796	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12132298	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12132349	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs296543	0.85[EUR][1000 genomes]
rs35730213	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs3861929	1.00[ASN][1000 genomes]
rs404339	0.87[EUR][1000 genomes]
rs41299637	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs55838263	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs59655222	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7522462	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7554511	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs905634	0.83[EUR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)