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rVarBase
SNP Report
Basic Infomation
Name
rs905634  
dbSNP
Location
chr:1,200884985
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10800746
0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11583546
0.81[EUR][1000 genomes]
rs12131796
0.82[EUR][1000 genomes]
rs12132298
0.82[EUR][1000 genomes]
rs12132349
0.81[EUR][1000 genomes]
rs296520
0.83[EUR][1000 genomes]
rs35730213
0.82[EUR][1000 genomes]
rs41299637
0.82[EUR][1000 genomes]
rs55838263
0.81[EUR][1000 genomes]
rs59250396
0.89[ASN][1000 genomes]
rs59655222
0.82[EUR][1000 genomes]
rs7522462
0.84[EUR][1000 genomes]
rs7554511
0.82[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
C1orf106
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)