SNP Report
Basic Infomation
| Name | rs272863 dbSNP |
|---|---|
| Location | chr:5,131683652 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 45)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1050150 | 0.83[ASN][1000 genomes] |
| rs149218 | 0.88[ASN][1000 genomes] |
| rs183894 | 0.87[ASN][1000 genomes] |
| rs2516788 | 0.86[ASN][1000 genomes] |
| rs2569266 | 0.81[ASN][1000 genomes] |
| rs2631361 | 0.86[ASN][1000 genomes] |
| rs2631363 | 0.86[ASN][1000 genomes] |
| rs2631365 | 0.81[ASN][1000 genomes] |
| rs2631370 | 0.81[ASN][1000 genomes] |
| rs270602 | 0.86[ASN][1000 genomes] |
| rs270605 | 0.80[ASN][1000 genomes] |
| rs270613 | 0.80[ASN][1000 genomes] |
| rs272842 | 0.82[ASN][1000 genomes] |
| rs272849 | 0.87[ASN][1000 genomes] |
| rs272852 | 0.82[ASN][1000 genomes] |
| rs272860 | 0.81[ASN][1000 genomes] |
| rs272865 | 0.84[ASN][1000 genomes] |
| rs272866 | 0.81[ASN][1000 genomes] |
| rs272867 | 0.84[ASN][1000 genomes] |
| rs272869 | 0.88[ASN][1000 genomes] |
| rs272871 | 0.87[ASN][1000 genomes] |
| rs272874 | 0.88[ASN][1000 genomes] |
| rs272875 | 0.84[ASN][1000 genomes] |
| rs272881 | 0.84[ASN][1000 genomes] |
| rs272884 | 0.84[ASN][1000 genomes] |
| rs272886 | 0.83[ASN][1000 genomes] |
| rs272889 | 0.87[ASN][1000 genomes] |
| rs272893 | 0.87[ASN][1000 genomes] |
| rs272894 | 0.82[ASN][1000 genomes] |
| rs273897 | 0.84[ASN][1000 genomes] |
| rs273900 | 0.82[ASN][1000 genomes] |
| rs273902 | 0.87[ASN][1000 genomes] |
| rs273914 | 0.82[ASN][1000 genomes] |
| rs274546 | 0.86[ASN][1000 genomes] |
| rs274560 | 0.86[ASN][1000 genomes] |
| rs274561 | 0.86[ASN][1000 genomes] |
| rs274562 | 0.86[ASN][1000 genomes] |
| rs274563 | 0.83[ASN][1000 genomes] |
| rs274566 | 0.81[ASN][1000 genomes] |
| rs274567 | 0.86[ASN][1000 genomes] |
| rs274568 | 0.81[ASN][1000 genomes] |
| rs441969 | 0.81[ASN][1000 genomes] |
| rs4705933 | 0.84[ASN][1000 genomes] |
| rs610735 | 0.85[ASN][1000 genomes] |
| rs611084 | 0.86[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000233006 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014