SNP Report
Name | rs2708444   dbSNP |
---|---|
Location | chr:12,40645772 |
Allele | A/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1529376 | 1.00[AMR][1000 genomes] |
rs17490397 | 0.84[YRI][hapmap] |
rs17490796 | 1.00[AMR][1000 genomes] |
rs17490872 | 1.00[AMR][1000 genomes] |
rs17491082 | 1.00[AMR][1000 genomes] |
rs17491410 | 1.00[AMR][1000 genomes] |
rs17491473 | 1.00[AMR][1000 genomes] |
rs17491673 | 1.00[AMR][1000 genomes] |
rs17519034 | 0.84[YRI][hapmap] |
rs17519825 | 1.00[AMR][1000 genomes] |
rs17520445 | 1.00[AMR][1000 genomes] |
rs17520459 | 1.00[AMR][1000 genomes] |
rs17520606 | 1.00[AMR][1000 genomes] |
rs2252434 | 0.92[YRI][hapmap];0.84[AFR][1000 genomes] |
rs2256286 | 0.91[YRI][hapmap];0.84[AFR][1000 genomes] |
rs2256408 | 0.92[YRI][hapmap];0.84[AFR][1000 genomes] |
rs2638273 | 0.92[YRI][hapmap] |
rs2708439 | 0.92[YRI][hapmap];0.84[AFR][1000 genomes] |
rs2708440 | 0.83[YRI][hapmap];0.84[AFR][1000 genomes] |
rs2723262 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2723263 | 0.87[AFR][1000 genomes] |
rs2723267 | 0.92[YRI][hapmap];0.84[AFR][1000 genomes] |
rs2723272 | 1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2723273 | 0.92[YRI][hapmap];0.84[AFR][1000 genomes] |
rs7975730 | 1.00[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
CREB3L4 | Distal transcriptional regulation |
SLC39A1 | Distal transcriptional regulation |
MUC19 | Distal transcriptional regulation |
LRRK2 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014