SNP Report
Name | rs17490397   dbSNP |
---|---|
Location | chr:12,40585656 |
Allele | A/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs17489344 | 1.00[AMR][1000 genomes] |
rs17490062 | 1.00[AMR][1000 genomes] |
rs17518532 | 1.00[AMR][1000 genomes] |
rs17518910 | 1.00[AMR][1000 genomes] |
rs17519034 | 1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2252434 | 0.92[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2256286 | 0.91[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2256408 | 0.92[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2638273 | 0.92[YRI][hapmap];1.00[AMR][1000 genomes] |
rs2708439 | 0.92[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2708440 | 0.83[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2708444 | 0.84[YRI][hapmap] |
rs2723267 | 0.92[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2723272 | 0.84[YRI][hapmap] |
rs2723273 | 0.92[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28370720 | 1.00[AMR][1000 genomes] |
rs28370724 | 1.00[AMR][1000 genomes] |
rs28370743 | 1.00[AMR][1000 genomes] |
rs28370761 | 1.00[AMR][1000 genomes] |
rs28370790 | 1.00[AMR][1000 genomes] |
rs28370793 | 1.00[AMR][1000 genomes] |
rs28740214 | 1.00[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
LRRK2 | Proximal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014