SNP Report
| Name | rs28370761   dbSNP |
|---|---|
| Location | chr:12,40402245 |
| Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs17489344 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs17490062 | 1.00[AMR][1000 genomes] |
| rs17490397 | 1.00[AMR][1000 genomes] |
| rs17518532 | 1.00[AMR][1000 genomes] |
| rs17518910 | 1.00[AMR][1000 genomes] |
| rs17519034 | 1.00[AMR][1000 genomes] |
| rs2638273 | 1.00[AMR][1000 genomes] |
| rs28370694 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370705 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370706 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370707 | 0.95[AFR][1000 genomes] |
| rs28370714 | 1.00[AMR][1000 genomes] |
| rs28370720 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370724 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370743 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370790 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370793 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28740214 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7310416 | 1.00[AMR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| SLC2A13 | Distal transcriptional regulation |
| LRRK2 | Distal transcriptional regulation |
| SLC2A13 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




