SNP Report
Name | rs2723267   dbSNP |
---|---|
Location | chr:12,40626689 |
Allele | A/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1352878 | 1.00[MEX][hapmap];0.87[MKK][hapmap] |
rs1352879 | 1.00[MEX][hapmap];0.87[MKK][hapmap] |
rs17489344 | 1.00[AMR][1000 genomes] |
rs17490062 | 1.00[AMR][1000 genomes] |
rs17490397 | 0.92[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17518532 | 1.00[AMR][1000 genomes] |
rs17518910 | 1.00[AMR][1000 genomes] |
rs17519034 | 0.92[YRI][hapmap];1.00[AMR][1000 genomes] |
rs2249281 | 1.00[MEX][hapmap] |
rs2252434 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2256286 | 1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2256408 | 1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2638273 | 1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2708439 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2708440 | 0.91[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2708444 | 0.92[YRI][hapmap];0.84[AFR][1000 genomes] |
rs2723262 | 0.84[AFR][1000 genomes] |
rs2723272 | 0.92[YRI][hapmap];0.87[AFR][1000 genomes] |
rs2723273 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28370790 | 1.00[AMR][1000 genomes] |
rs28370793 | 1.00[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
LRRK2 | RNA binding protein mediated regulation |
Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL related gene | Source |
---|---|
JARID1C | SCAN |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014