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rVarBase
SNP Report
Basic Infomation
Name
rs17491673  
dbSNP
Location
chr:12,40747533
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1529376
0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17490796
1.00[AMR][1000 genomes]
rs17490872
1.00[AMR][1000 genomes]
rs17491082
1.00[AMR][1000 genomes]
rs17491410
1.00[AMR][1000 genomes]
rs17491473
0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17519825
1.00[AMR][1000 genomes]
rs17520445
0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17520459
0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17520606
0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2708444
1.00[AMR][1000 genomes]
rs2723262
1.00[AMR][1000 genomes]
rs2723272
1.00[AMR][1000 genomes]
rs7975730
1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
LRRK2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)