SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs2227551	0.80[CEU][hapmap];0.80[AMR][1000 genomes]
rs2227552	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2227560	0.90[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs2459449	0.87[CHB][hapmap];0.87[JPT][hapmap];0.89[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2633316	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2633320	0.95[CEU][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2633322	0.95[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2675667	0.95[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.91[YRI][hapmap];0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2675676	0.80[CEU][hapmap]
rs2688611	0.81[CEU][hapmap]
rs2688617	0.81[CEU][hapmap]
rs2688620	0.94[CEU][hapmap];0.92[YRI][hapmap];0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
C10orf55	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)