SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs2227551	0.95[CHB][hapmap];0.86[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.83[YRI][hapmap];0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2459449	0.87[CHB][hapmap];0.92[MEX][hapmap]
rs2633316	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2633322	1.00[CEU][hapmap];0.91[GIH][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2675667	0.90[CEU][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2688620	0.88[CEU][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2688624	0.95[CEU][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CAMK2G	Distal transcriptional regulation
C10orf55	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 4)