SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 14)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1074174	0.80[ASN][1000 genomes]
rs2054902	0.85[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2130096	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2468947	0.84[ASN][1000 genomes]
rs2468948	0.80[ASN][1000 genomes]
rs2634679	0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2732451	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2732460	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2732464	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2732474	0.80[ASN][1000 genomes]
rs2732475	0.80[ASN][1000 genomes]
rs2732477	0.80[ASN][1000 genomes]
rs60908321	0.85[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs901962	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZNF641	Proximal transcriptional regulation
WDR74	Distal transcriptional regulation
RNU5E-1	Distal transcriptional regulation
MICU1	Distal transcriptional regulation
NNMT	Distal transcriptional regulation
WDR61	Distal transcriptional regulation
RALY	Distal transcriptional regulation
ENSG00000228265	Distal transcriptional regulation
ENSG00000257763	Distal transcriptional regulation
ENSG00000258273	Distal transcriptional regulation
ENSG00000269282	Distal transcriptional regulation
ADAMTS17	Distal transcriptional regulation
ZNF641	Distal transcriptional regulation
CACNB3	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)