SNP Report

Basic Infomation

Name	rs2206446 dbSNP
Location	chr:20,44163209
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 18)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11696603	0.88[ASN][1000 genomes]
rs16990216	0.81[CHD][hapmap];1.00[GIH][hapmap]
rs16990233	0.86[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs16990235	0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.87[TSI][hapmap];0.84[ASN][1000 genomes]
rs16990238	0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.87[TSI][hapmap];0.84[ASN][1000 genomes]
rs6017582	1.00[CHD][hapmap];1.00[GIH][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap]
rs6032241	0.86[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs6032242	0.84[ASN][1000 genomes]
rs6032243	0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs6032244	0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs6065834	1.00[ASW][hapmap];0.88[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap];0.86[ASN][1000 genomes]
rs6073746	1.00[CHD][hapmap];0.92[GIH][hapmap];0.89[JPT][hapmap]
rs6073750	0.89[JPT][hapmap];1.00[YRI][hapmap]
rs6073763	0.81[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap]
rs6073771	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6073772	1.00[CEU][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6104182	0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.82[ASN][1000 genomes]
rs73127344	0.82[AFR][1000 genomes];0.86[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000232135	Distal transcriptional regulation
WFDC6	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)