SNP Report

Basic Infomation

Name	rs6073763 dbSNP
Location	chr:20,44121170
Allele	G/T

LD-proxy of rSNPs(r²>0.8) (count: 22)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11696603	0.80[EUR][1000 genomes]
rs16990216	0.88[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap]
rs16990233	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs16990235	1.00[CEU][hapmap];0.82[CHD][hapmap];1.00[GIH][hapmap];0.85[TSI][hapmap];0.87[EUR][1000 genomes]
rs16990238	1.00[CEU][hapmap];0.82[CHD][hapmap];1.00[GIH][hapmap];0.85[TSI][hapmap];0.87[EUR][1000 genomes]
rs1997745	0.89[YRI][hapmap]
rs2206446	0.81[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap]
rs4449202	1.00[CEU][hapmap]
rs6017582	1.00[CEU][hapmap];0.82[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs6017588	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6032241	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6032242	0.87[EUR][1000 genomes]
rs6032243	1.00[CEU][hapmap];0.97[EUR][1000 genomes]
rs6032244	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs6065826	0.93[AFR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6065834	1.00[MEX][hapmap]
rs6073746	0.82[CHD][hapmap];0.92[GIH][hapmap];1.00[TSI][hapmap]
rs6073749	0.80[EUR][1000 genomes]
rs6073750	1.00[CEU][hapmap];0.80[EUR][1000 genomes]
rs6073772	0.90[CHB][hapmap];0.93[JPT][hapmap];0.90[ASN][1000 genomes]
rs6104182	0.90[ASW][hapmap];1.00[CEU][hapmap];0.82[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73907980	0.80[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RPL5P2	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)