SNP Report

Basic Infomation

Name	rs1946627 dbSNP
Location	chr:8,130613493
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 47)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10098310	0.84[ASN][1000 genomes]
rs10956485	0.96[ASN][1000 genomes]
rs11785889	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12542190	0.83[ASN][1000 genomes]
rs12548063	0.81[ASN][1000 genomes]
rs12676406	0.88[ASN][1000 genomes]
rs12676428	0.89[ASN][1000 genomes]
rs12677963	0.81[ASN][1000 genomes]
rs12681229	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13276769	0.83[ASN][1000 genomes]
rs13280084	0.84[ASN][1000 genomes]
rs1368700	0.83[ASN][1000 genomes]
rs1433577	0.84[ASN][1000 genomes]
rs1433580	0.91[ASN][1000 genomes]
rs1433585	0.83[EUR][1000 genomes]
rs1583333	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1594774	0.82[ASN][1000 genomes]
rs16904119	0.81[ASN][1000 genomes]
rs16904121	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs16904123	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16904126	0.82[EUR][1000 genomes]
rs2043404	0.81[ASN][1000 genomes]
rs2163952	0.81[ASN][1000 genomes]
rs2217715	0.86[ASN][1000 genomes]
rs2395904	0.97[ASN][1000 genomes]
rs2395906	0.81[ASN][1000 genomes]
rs35389394	0.83[ASN][1000 genomes]
rs4319050	0.82[ASN][1000 genomes]
rs59292525	0.81[ASN][1000 genomes]
rs61453473	0.82[ASN][1000 genomes]
rs6470742	0.82[ASN][1000 genomes]
rs6470743	0.87[ASN][1000 genomes]
rs67229233	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6982371	0.81[ASN][1000 genomes]
rs6982553	0.81[ASN][1000 genomes]
rs7000230	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7000289	0.89[ASN][1000 genomes]
rs7000320	0.81[ASN][1000 genomes]
rs7005227	0.83[ASN][1000 genomes]
rs7006214	0.82[ASN][1000 genomes]
rs7008811	0.90[ASN][1000 genomes]
rs7011870	0.82[ASN][1000 genomes]
rs7840067	0.82[ASN][1000 genomes]
rs7840913	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7846327	0.82[ASN][1000 genomes]
rs9642890	0.81[ASN][1000 genomes]
rs996313	0.84[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CCDC26	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)