SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11785889	0.81[EUR][1000 genomes]
rs12681229	0.94[CEU][hapmap];0.85[EUR][1000 genomes]
rs1583333	0.87[CEU][hapmap];0.83[TSI][hapmap];0.83[EUR][1000 genomes]
rs16904121	0.80[CEU][hapmap];0.83[TSI][hapmap];0.81[EUR][1000 genomes]
rs16904123	0.87[CEU][hapmap];0.82[TSI][hapmap];0.83[EUR][1000 genomes]
rs16904126	1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs16904129	0.93[CEU][hapmap];0.86[GIH][hapmap];0.84[MEX][hapmap];0.82[TSI][hapmap];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1946627	0.83[EUR][1000 genomes]
rs4487716	0.83[EUR][1000 genomes]
rs58811566	0.83[EUR][1000 genomes]
rs67229233	0.84[EUR][1000 genomes]
rs7840913	0.84[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CCDC26	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)