SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12681229	0.87[CEU][hapmap]
rs1433585	0.93[CEU][hapmap];0.86[GIH][hapmap];0.84[MEX][hapmap];0.82[TSI][hapmap];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1583333	0.80[CEU][hapmap]
rs16904123	0.80[CEU][hapmap]
rs16904126	0.84[ASW][hapmap];0.93[CEU][hapmap];0.86[GIH][hapmap];0.82[TSI][hapmap];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17181607	0.83[CHB][hapmap]
rs4487716	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs58811566	0.83[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs72716379	0.84[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CCDC26	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)