SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10800775	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1122481	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12409010	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2365649	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs3729842	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4915516	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4915517	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
TNNT2	Proximal transcriptional regulation
TNNT2	Distal transcriptional regulation
TNNT2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)