SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11465722	0.92[CEU][hapmap];0.82[YRI][hapmap]
rs12105808	1.00[CEU][hapmap];0.85[AMR][1000 genomes]
rs13425475	0.91[CEU][hapmap]
rs1420089	1.00[CEU][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4851567	1.00[CEU][hapmap];0.85[AMR][1000 genomes]
rs4851581	0.92[CEU][hapmap]
rs62151701	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs62151719	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs62152661	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62152662	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62152663	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs917998	0.92[CEU][hapmap];0.82[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
IL18R1	Distal transcriptional regulation
IL1RL1	RNA binding protein mediated regulation
IL18R1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)