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rVarBase
SNP Report
Basic Infomation
Name
rs62151719  
dbSNP
Location
chr:2,102941252
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12105808
0.92[AMR][1000 genomes]
rs1420089
0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17696376
0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4851567
0.92[AMR][1000 genomes]
rs62151701
0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs62152661
0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs62152662
0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs62152663
0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
IL1RL1
RNA binding protein mediated regulation
IL18R1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)