SNP Report

Basic Infomation

Name	rs17403349 dbSNP
Location	chr:11,63736823
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 34)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10897460	1.00[TSI][hapmap]
rs11231665	1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11231673	1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11494059	0.83[AMR][1000 genomes]
rs12099085	0.83[MKK][hapmap];1.00[TSI][hapmap]
rs12271959	1.00[TSI][hapmap]
rs12277386	1.00[AMR][1000 genomes]
rs12277838	1.00[AMR][1000 genomes]
rs12285283	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12288290	1.00[AMR][1000 genomes]
rs12417157	0.81[AFR][1000 genomes]
rs320110	1.00[TSI][hapmap]
rs320115	1.00[TSI][hapmap]
rs34689425	0.83[AMR][1000 genomes]
rs55951521	1.00[EUR][1000 genomes]
rs55956041	1.00[EUR][1000 genomes]
rs56217591	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57864399	1.00[AMR][1000 genomes]
rs57868637	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59502039	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61475860	0.81[AFR][1000 genomes]
rs61653882	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7106510	1.00[EUR][1000 genomes]
rs7123788	1.00[TSI][hapmap]
rs7929867	1.00[AMR][1000 genomes]
rs7933899	1.00[ASW][hapmap];0.94[LWK][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs7938631	0.85[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7948681	0.82[ASW][hapmap];0.83[LWK][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.80[YRI][hapmap]
rs7952003	0.82[ASW][hapmap];0.81[LWK][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap]
rs9326430	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9630214	1.00[AMR][1000 genomes]
rs9630215	1.00[AMR][1000 genomes]
rs9804541	1.00[TSI][hapmap]
rs9888177	1.00[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RNU6-45	Proximal transcriptional regulation
NAA40	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)