SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 25)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11231665	1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11494059	0.83[AMR][1000 genomes]
rs12277386	1.00[AMR][1000 genomes]
rs12277838	1.00[AMR][1000 genomes]
rs12285283	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12288290	1.00[AMR][1000 genomes]
rs17403349	1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34689425	0.83[AMR][1000 genomes]
rs55951521	1.00[EUR][1000 genomes]
rs55956041	1.00[EUR][1000 genomes]
rs56217591	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57864399	1.00[AMR][1000 genomes]
rs57868637	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59502039	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61653882	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7106510	1.00[EUR][1000 genomes]
rs7929867	1.00[AMR][1000 genomes]
rs7933899	0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs7938631	0.86[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7948681	0.84[YRI][hapmap]
rs7952003	0.90[YRI][hapmap]
rs9326430	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9630214	1.00[AMR][1000 genomes]
rs9630215	1.00[AMR][1000 genomes]
rs9888177	1.00[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
MACROD1	Proximal transcriptional regulation
STIP1	Distal transcriptional regulation
MACROD1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)