SNP Report
Basic Infomation
| Name | rs17128169 dbSNP |
|---|---|
| Location | chr:12,40840416 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 34)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11564134 | 1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[AMR][1000 genomes] |
| rs11564174 | 1.00[CEU][hapmap];1.00[AMR][1000 genomes] |
| rs11564186 | 1.00[CEU][hapmap] |
| rs11564208 | 1.00[CEU][hapmap] |
| rs11564254 | 1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[AMR][1000 genomes] |
| rs11564257 | 1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[AMR][1000 genomes] |
| rs17128172 | 1.00[CEU][hapmap] |
| rs17128396 | 1.00[CEU][hapmap] |
| rs17521316 | 1.00[CEU][hapmap] |
| rs73094944 | 1.00[AMR][1000 genomes] |
| rs73094986 | 1.00[AMR][1000 genomes] |
| rs73097442 | 1.00[AMR][1000 genomes] |
| rs73097447 | 1.00[AMR][1000 genomes] |
| rs73097459 | 1.00[AMR][1000 genomes] |
| rs73097463 | 1.00[AMR][1000 genomes] |
| rs73097494 | 1.00[AMR][1000 genomes] |
| rs73101527 | 1.00[AMR][1000 genomes] |
| rs73102750 | 1.00[AMR][1000 genomes] |
| rs73102757 | 1.00[AMR][1000 genomes] |
| rs73102773 | 1.00[AMR][1000 genomes] |
| rs73108342 | 1.00[AMR][1000 genomes] |
| rs73108345 | 1.00[AMR][1000 genomes] |
| rs73108347 | 1.00[AMR][1000 genomes] |
| rs73108352 | 1.00[AMR][1000 genomes] |
| rs73108357 | 1.00[AMR][1000 genomes] |
| rs73108363 | 1.00[AMR][1000 genomes] |
| rs73108365 | 1.00[AMR][1000 genomes] |
| rs73108371 | 1.00[AMR][1000 genomes] |
| rs73108376 | 1.00[AMR][1000 genomes] |
| rs73114293 | 1.00[AMR][1000 genomes] |
| rs73117528 | 1.00[AMR][1000 genomes] |
| rs7315719 | 1.00[CEU][hapmap];1.00[AMR][1000 genomes] |
| rs7315853 | 1.00[CEU][hapmap];1.00[AMR][1000 genomes] |
| rs9668092 | 1.00[CEU][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000258167 | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
| eQTL related gene | Source |
|---|---|
| UGT2B17 | seeQTL |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014