SNP Report

Basic Infomation

Name	rs13812 dbSNP
Location	chr:2,65497682
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 68)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10194628	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11126032	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11548392	0.87[AFR][1000 genomes]
rs11887168	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11887325	0.81[CEU][hapmap];1.00[CHD][hapmap];0.90[TSI][hapmap];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12713530	1.00[ASN][1000 genomes]
rs12997435	1.00[ASN][1000 genomes]
rs13001292	1.00[ASN][1000 genomes]
rs13011574	1.00[CHD][hapmap]
rs13012226	1.00[ASN][1000 genomes]
rs13027430	1.00[ASN][1000 genomes]
rs13423881	1.00[CHD][hapmap]
rs14294	0.87[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17533992	1.00[CHD][hapmap]
rs17534153	1.00[CHD][hapmap]
rs17755105	0.87[AFR][1000 genomes]
rs2008312	1.00[CHD][hapmap]
rs268854	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs268856	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs268865	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs268872	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs268874	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34004859	1.00[CHD][hapmap]
rs34004866	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34012288	1.00[ASN][1000 genomes]
rs34092394	1.00[ASN][1000 genomes]
rs34134287	1.00[ASN][1000 genomes]
rs34269329	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34369145	1.00[ASN][1000 genomes]
rs34486588	1.00[ASN][1000 genomes]
rs34518021	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs34657195	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34667950	1.00[ASN][1000 genomes]
rs34767439	1.00[ASN][1000 genomes]
rs34840820	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34842788	1.00[ASN][1000 genomes]
rs34849808	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34866486	1.00[ASN][1000 genomes]
rs34961685	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35001546	1.00[ASN][1000 genomes]
rs35291688	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35295972	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35481759	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35503765	1.00[ASN][1000 genomes]
rs35525037	1.00[ASN][1000 genomes]
rs35578846	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35638142	1.00[ASN][1000 genomes]
rs35925158	1.00[ASN][1000 genomes]
rs36072792	1.00[ASN][1000 genomes]
rs55849982	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6546134	1.00[CHD][hapmap]
rs6546142	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6704941	1.00[CHD][hapmap]
rs6727281	1.00[CHD][hapmap]
rs6752302	1.00[ASN][1000 genomes]
rs6756260	1.00[ASN][1000 genomes]
rs71424157	1.00[ASN][1000 genomes]
rs71424158	1.00[ASN][1000 genomes]
rs71424159	1.00[ASN][1000 genomes]
rs71424160	1.00[ASN][1000 genomes]
rs71424163	1.00[ASN][1000 genomes]
rs7564461	1.00[ASN][1000 genomes]
rs7589984	1.00[CHD][hapmap]
rs7604049	1.00[ASN][1000 genomes]
rs869548	1.00[CHD][hapmap]
rs874952	1.00[CHD][hapmap]
rs8771	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9309369	1.00[CHD][hapmap]

rSNP related genes

Symbol	Regulation type
ACTR2	Proximal transcriptional regulation
ACTR2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)