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rVarBase
SNP Report
Basic Infomation
Name
rs17755105  
dbSNP
Location
chr:2,65544955
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 10)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11548392
1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13812
0.87[AFR][1000 genomes]
rs14294
1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs268854
0.87[AFR][1000 genomes]
rs268856
0.87[AFR][1000 genomes]
rs268865
0.87[AFR][1000 genomes]
rs268872
0.87[AFR][1000 genomes]
rs35291688
0.87[AFR][1000 genomes]
rs6546142
0.87[AFR][1000 genomes]
rs8771
0.87[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
SPRED2
Distal transcriptional regulation
SPRED2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)