SNP Report

Basic Infomation

Name	rs71424163 dbSNP
Location	chr:2,65359319
Allele	T/G

LD-proxy of rSNPs(r²>0.8) (count: 65)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10194628	1.00[ASN][1000 genomes]
rs11126032	1.00[ASN][1000 genomes]
rs11887168	1.00[ASN][1000 genomes]
rs11887325	1.00[ASN][1000 genomes]
rs12713530	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12997435	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12998056	0.87[EUR][1000 genomes]
rs13001292	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13012226	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13022459	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13027430	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13034506	0.87[EUR][1000 genomes]
rs13812	1.00[ASN][1000 genomes]
rs14294	1.00[ASN][1000 genomes]
rs268854	1.00[ASN][1000 genomes]
rs268856	1.00[ASN][1000 genomes]
rs268865	1.00[ASN][1000 genomes]
rs268872	1.00[ASN][1000 genomes]
rs268874	1.00[ASN][1000 genomes]
rs34004866	1.00[ASN][1000 genomes]
rs34012288	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34092394	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34113653	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34134287	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34269329	1.00[ASN][1000 genomes]
rs34291961	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34369145	1.00[ASN][1000 genomes]
rs34486588	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34657195	1.00[ASN][1000 genomes]
rs34667950	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34767439	1.00[ASN][1000 genomes]
rs34840820	1.00[ASN][1000 genomes]
rs34842788	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34849808	1.00[ASN][1000 genomes]
rs34866486	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34876673	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34909104	0.87[EUR][1000 genomes]
rs34961685	1.00[ASN][1000 genomes]
rs35001546	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35291688	1.00[ASN][1000 genomes]
rs35295972	1.00[ASN][1000 genomes]
rs35389602	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35481759	1.00[ASN][1000 genomes]
rs35503765	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35525037	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35578846	1.00[ASN][1000 genomes]
rs35638142	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35706442	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35925158	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36072792	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55849982	1.00[ASN][1000 genomes]
rs6546142	1.00[ASN][1000 genomes]
rs6752302	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6756260	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71424152	0.87[EUR][1000 genomes]
rs71424154	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71424156	1.00[ASN][1000 genomes]
rs71424157	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71424158	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71424159	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71424160	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7564461	1.00[ASN][1000 genomes]
rs7600616	0.80[AFR][1000 genomes]
rs7604049	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8771	1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
RAB1A	Proximal transcriptional regulation
ACTR2	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)