SNP Report
| Name | rs12720250   dbSNP |
|---|---|
| Location | chr:19,10479814 |
| Allele | G/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs12720222 | 0.81[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs12720231 | 0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs12720233 | 0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs12720234 | 0.89[AFR][1000 genomes] |
| rs12720235 | 0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12720248 | 0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12720253 | 0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12720260 | 0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12720279 | 0.83[AFR][1000 genomes] |
| rs12720299 | 0.81[AFR][1000 genomes] |
| rs12720328 | 0.84[EUR][1000 genomes] |
| rs12720352 | 0.91[EUR][1000 genomes] |
| rs12981942 | 0.86[AMR][1000 genomes];0.86[EUR][1000 genomes] |
| rs280523 | 0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs35221071 | 0.91[EUR][1000 genomes] |
| rs8104304 | 0.91[ASN][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| TYK2 | Proximal transcriptional regulation |
| TYK2 | Distal transcriptional regulation |
| TYK2 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




