SNP Report

Basic Infomation

Name	rs12595333 dbSNP
Location	chr:15,91201630
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10083547	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10520693	0.88[EUR][1000 genomes]
rs11633340	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11638226	0.86[EUR][1000 genomes]
rs12439713	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12442167	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12443446	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12593600	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12593637	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16944705	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17180345	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3743402	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3803565	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4306478	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4343256	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4506872	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4534817	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6416555	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6416556	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6496716	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7178587	0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7183485	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7495138	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7495772	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000245479	Proximal transcriptional regulation
UNC45A	Distal transcriptional regulation
HDDC3	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)